MEMOFinder - software for finding consensus motifs using multiple methods

MeMoFinder is a software helping researchers in the task of finding motifs in biological sequences using a consensus approach. This means that instead of developing a new method for finding sequence motifs de novo we have focused on finding the consensus between different available tools and data stored in public motif databases such as JASPAR.

You can use MeMoFinder through publicly available web interface. You can also download the software as a jar file. The source code is also available under the GNU GPL license.

You can start by looking at the overview of the method or you can go directly to the input form. There is also the help page detailing the usage of different options of the software. The description of the method is also posted public repository so that you can easily cite it if you find it useful

If you have any problems using this software, please contact us: